BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C07SP1|AL428875
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1587 1763 0.0
>3x_Contig1587
Length = 10277
Score = 1763 bits (888), Expect = 0.0
Identities = 899/904 (99%)
Strand = Plus / Minus
Query: 1 agttttccatgttccagctttgactagccttacagatatcaacagcaaagtttctcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7320 agttttccatgttccagctttgactagccttacagatatcaacagcaaagtttctcaaca 7261
Query: 61 aagtcttaccttgagtggagtgagtgacttctggatggaattgaataccgtagatttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7260 aagtcttaccttgagtggagtgagtgacttctggatggaattgaataccgtagatttgct 7201
Query: 121 tgtcttcattagcgataccacagaatggagagttttcagaggtagcagtgatcttgaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7200 tgtcttcattagcgataccacagaatggagagttttcagaggtagcagtgatcttgaaac 7141
Query: 181 cagctggcaagttgtgaactttatcgtgatgagacatccaaacggtagagtggtcgacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7140 cagctggcaagttgtgaactttatcgtgatgagacatccaaacggtagagtggtcgacat 7081
Query: 241 tagcaaataatggacagctcttgtcttcaacgcgcaaagtagctgggccatattctctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7080 tagcaaataatggacagctcttgtcttcaacgcgcaaagtagctgggccatattctctct 7021
Query: 301 tttcaccacgaccaacttcggtattgttaatccaggcaatttcttgcaaaccgtaacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7020 tttcaccacgaccaacttcggtattgttaatccaggcaatttcttgcaaaccgtaacaga 6961
Query: 361 tacctagaattggaacacccaaatcgaaaatagccttgtcaacgtgaggrgcatccttct 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6960 tacctagaattggaacacccaaatcgaaaatagccttgtcaacgtgaggagcatccttct 6901
Query: 421 cgtagacagaatatggaccaccagaaagaatgacacccttaggtttccagtgcaaatcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6900 cgtagacagaatatggaccaccagaaagaatgacacccttaggtttccagtgcaaatcgg 6841
Query: 481 caatcttttgagtacatggaagcatttcggcgtacacattgaactctctcaatcttctgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6840 caatcttttgagtacatggaagcatttcggcgtacacattgaactctctcaatcttctgg 6781
Query: 541 taatcaaatgagagtactgagaaccgaaatccaacaccaagatggtgtcaaacacgttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6780 taatcaaatgagagtactgagaaccgaaatccaacaccaagatggtgtcaaacacgttgg 6721
Query: 601 acacttcaacaggagacatatttaattgattggggtatgagttaggttggtaatttgcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6720 acacttcaacaggagacatatttaattgattggggtatgagttaggttggtaatttgcta 6661
Query: 661 aagtagaaaccttggactatggaccgttaacactccagcgataggaactaagttgaccga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6660 aagtagaaaccttggactatggaccgttaacactccagcgataggaactaagttgaccga 6601
Query: 721 tgtactgaaactaagattaagaatactattaaaatatacaaaagaattcccaccaaccta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6600 tgtactgaaactaagattaagaatactattaaaatatacaaaagaattcccaccaaccta 6541
Query: 781 agaagatgcgaaasaataaaagaaaaatagattaagaacaagcttctcttaattgatcaa 840
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6540 agaagatgcgaaagcaataaagaaaaatagattaagaacaagcttctcttaattgatcaa 6481
Query: 841 ctctgcttgccagtaggataagttattcgaacttgaagagaaaaaatatcaatgaaatat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6480 ctctgcttgccagtaggataagttattcgaacttgaagagaaaaaatatcaatgaaatat 6421
Query: 901 atac 904
||||
Sbjct: 6420 atac 6417
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6961
Number of Sequences: 1807
Number of extensions: 6961
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)